hf patient
Interpretable phenotyping of Heart Failure patients with Dutch discharge letters
Torri, Vittorio, Boonstra, Machteld J., van de Veerdonk, Marielle C., Kalkman, Deborah N., Uijl, Alicia, Ieva, Francesca, Abu-Hanna, Ameen, Asselbergs, Folkert W., Calixto, Iacer
Objective: Heart failure (HF) patients present with diverse phenotypes affecting treatment and prognosis. This study evaluates models for phenotyping HF patients based on left ventricular ejection fraction (LVEF) classes, using structured and unstructured data, assessing performance and interpretability. Materials and Methods: The study analyzes all HF hospitalizations at both Amsterdam UMC hospitals (AMC and VUmc) from 2015 to 2023 (33,105 hospitalizations, 16,334 patients). Data from AMC were used for model training, and from VUmc for external validation. The dataset was unlabelled and included tabular clinical measurements and discharge letters. Silver labels for LVEF classes were generated by combining diagnosis codes, echocardiography results, and textual mentions. Gold labels were manually annotated for 300 patients for testing. Multiple Transformer-based (black-box) and Aug-Linear (white-box) models were trained and compared with baselines on structured and unstructured data. To evaluate interpretability, two clinicians annotated 20 discharge letters by highlighting information they considered relevant for LVEF classification. These were compared to SHAP and LIME explanations from black-box models and the inherent explanations of Aug-Linear models. Results: BERT-based and Aug-Linear models, using discharge letters alone, achieved the highest classification results (AUC=0.84 for BERT, 0.81 for Aug-Linear on external validation), outperforming baselines. Aug-Linear explanations aligned more closely with clinicians' explanations than post-hoc explanations on black-box models. Conclusions: Discharge letters emerged as the most informative source for phenotyping HF patients. Aug-Linear models matched black-box performance while providing clinician-aligned interpretability, supporting their use in transparent clinical decision-making.
Mining Social Determinants of Health for Heart Failure Patient 30-Day Readmission via Large Language Model
Shao, Mingchen, Kang, Youjeong, Hu, Xiao, Kwak, Hyunjung Gloria, Yang, Carl, Lu, Jiaying
Heart Failure (HF) affects millions of Americans and leads to high readmission rates, posing significant healthcare challenges. While Social Determinants of Health (SDOH) such as socioeconomic status and housing stability play critical roles in health outcomes, they are often underrepresented in structured EHRs and hidden in unstructured clinical notes. This study leverages advanced large language models (LLMs) to extract SDOHs from clinical text and uses logistic regression to analyze their association with HF readmissions.
Enhancing Mortality Prediction in Heart Failure Patients: Exploring Preprocessing Methods for Imbalanced Clinical Datasets
Kia, Hanif, Vali, Mansour, Sabahi, Hadi
Heart failure (HF) is a critical condition in which the accurate prediction of mortality plays a vital role in guiding patient management decisions. However, clinical datasets used for mortality prediction in HF often suffer from an imbalanced distribution of classes, posing significant challenges. In this paper, we explore preprocessing methods for enhancing one-month mortality prediction in HF patients. We present a comprehensive preprocessing framework including scaling, outliers processing and resampling as key techniques. We also employed an aware encoding approach to effectively handle missing values in clinical datasets. Our study utilizes a comprehensive dataset from the Persian Registry Of cardio Vascular disease (PROVE) with a significant class imbalance. By leveraging appropriate preprocessing techniques and Machine Learning (ML) algorithms, we aim to improve mortality prediction performance for HF patients. The results reveal an average enhancement of approximately 3.6% in F1 score and 2.7% in MCC for tree-based models, specifically Random Forest (RF) and XGBoost (XGB). This demonstrates the efficiency of our preprocessing approach in effectively handling Imbalanced Clinical Datasets (ICD). Our findings hold promise in guiding healthcare professionals to make informed decisions and improve patient outcomes in HF management.
Application of Machine Learning in Early Recommendation of Cardiac Resynchronization Therapy
Odigwe, Brendan E., Spinale, Francis G., Valafar, Homayoun
Heart failure (HF) is a leading cause of morbidity, mortality, and health care costs. Prolonged conduction through the myocardium can occur with HF, and a device-driven approach, termed cardiac resynchronization therapy (CRT), can improve left ventricular (LV) myocardial conduction patterns. While a functional benefit of CRT has been demonstrated, a large proportion of HF patients (30-50%) receiving CRT do not show sufficient improvement. Moreover, identifying HF patients that would benefit from CRT prospectively remains a clinical challenge. Accordingly, strategies to effectively predict those HF patients that would derive a functional benefit from CRT holds great medical and socio-economic importance. Thus, we used machine learning methods of classifying HF patients, namely Cluster Analysis, Decision Trees, and Artificial neural networks, to develop predictive models of individual outcomes following CRT. Clinical, functional, and biomarker data were collected in HF patients before and following CRT. A prospective 6-month endpoint of a reduction in LV volume was defined as a CRT response. Using this approach (418 responders, 412 non-responders), each with 56 parameters, we could classify HF patients based on their response to CRT with more than 95% success. We have demonstrated that using machine learning approaches can identify HF patients with a high probability of a positive CRT response (95% accuracy), and of equal importance, identify those HF patients that would not derive a functional benefit from CRT. Developing this approach into a clinical algorithm to assist in clinical decision-making regarding the use of CRT in HF patients would potentially improve outcomes and reduce health care costs.